› 2bnk

X-ray diffraction
2.9Å resolution

The structure of phage phi29 replication organizer protein p16.7

Released:
DOI: 10.2210/pdb2bnk/pdb
PDB entry 2bnk coloured by chain, front view.
PDB entry 2bnk coloured by chain, side view.
PDB entry 2bnk coloured by chain, top view.
Source organism: Bacillus virus phi29
Primary publication:
Structure of the functional domain of phi29 replication organizer: insights into oligomerization and dna binding.
Asensio JL, Albert A, Muñoz-Espín D, Gonzalez C, Hermoso J, Villar L, Jiménez-Barbero J, Salas M, Meijer WJ
J Biol Chem 280 20730-9 (2005)
PMID: 15772069

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-147751 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DNA replication protein 16.7 Chains: A, B
Molecule details ›
Chains: A, B
Length: 67 amino acids
Theoretical weight: 7.94 KDa
Source organism: Bacillus virus phi29
Expression system: Escherichia coli
UniProt:
  • Canonical: P16517 (Residues: 64-130; Coverage: 52%)
Gene name: 16.7
Sequence domains: Bacteriophage phi-29 early protein GP16.7
Structure domains: Phage phi29 replication organiser protein p16.7-like

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE BM16
Spacegroup: P61
Unit cell:
a: 95.395Å b: 95.395Å c: 47.572Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.271 0.27 0.289
Expression system: Escherichia coli

Quick links

Citations

1 review citation

Bacteriophage protein-protein interactions.
Häuser et al. (2012)
4 other articles

2 mentions without citation

A protein-DNA docking benchmark.
van Dijk et al. (2008)
1 more