› 2boq

X-ray diffraction
1.33Å resolution

Function and Biology Details

Reaction catalysed: 
1-(4-hydroxy-3-methoxyphenyl)-2-(2-methoxyphenoxy)propane-1,3-diol + H(2)O(2) = 4-hydroxy-3-methoxybenzaldehyde + 2-methoxyphenol + glycolaldehyde + H(2)O
Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-131734 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Versatile peroxidase VPL2 Chain: A
Molecule details ›
Chain: A
Length: 331 amino acids
Theoretical weight: 34.68 KDa
Source organism: Pleurotus eryngii
Expression system: Escherichia coli
UniProt:
  • Canonical: O94753 (Residues: 31-361; Coverage: 98%)
Gene name: vpl2
Sequence domains:
Structure domains:

Ligands and Environments


Cofactor: Ligand HEM 1 x HEM
4 bound ligands:
Ligand ZN 8 x ZN
Ligand MN 1 x MN
Ligand CAC 1 x CAC
Ligand CA 2 x CA
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SLS BEAMLINE X06SA
Spacegroup: P43
Unit cell:
a: 62.799Å b: 62.799Å c: 98.222Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.16 0.159 0.182
Expression system: Escherichia coli

Quick links

Citations

21 review citations

New and classic families of secreted fungal heme peroxidases.
Hofrichter et al. (2010)
20 more

16 mentions without citation

Microbial degradation of lignin: how a bulky recalcitrant polymer is efficiently recycled in nature and how we can take advantage of this.
Ruiz-Dueñas et al. (2009)
15 more