› 2dc0

X-ray diffraction
2Å resolution

Crystal structure of amidase

Released:
DOI: 10.2210/pdb2dc0/pdb
PDB entry 2dc0 coloured by chain, front view.
PDB entry 2dc0 coloured by chain, side view.
PDB entry 2dc0 coloured by chain, top view.
Source organism: Thermus thermophilus
Entry authors: Ohshima T, Sakuraba H, Ebihara A, Kanagawa M, Nakagawa N, Kuroishi C, Satoh S, Kuramitsu S, Yokoyama S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-177862 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Amidase domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 434 amino acids
Theoretical weight: 46.67 KDa
Source organism: Thermus thermophilus
Expression system: Escherichia coli
UniProt:
  • Canonical: Q5SHD3 (Residues: 1-434; Coverage: 100%)
Gene name: TTHA1797
Sequence domains: Amidase
Structure domains: Amidase signature (AS) domain

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 4 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL26B2
Spacegroup: P41212
Unit cell:
a: 81.34Å b: 81.34Å c: 313.26Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.22 0.22 0.24
Expression system: Escherichia coli

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