› 2deh

X-ray diffraction
2.45Å resolution

Crystal structure of tt0972 protein form Thermus Thermophilus with Cl(-) ions

Released:
DOI: 10.2210/pdb2deh/pdb
PDB entry 2deh coloured by chain, front view.
PDB entry 2deh coloured by chain, side view.
PDB entry 2deh coloured by chain, top view.
Source organism: Thermus thermophilus
Entry authors: Inagaki E, Nakano N, Shinkai A, Yokoyama S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo dodecamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-180840 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Dodecin Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 69 amino acids
Theoretical weight: 7.76 KDa
Source organism: Thermus thermophilus
Expression system: Escherichia coli
UniProt:
  • Canonical: Q72IR6 (Residues: 1-69; Coverage: 100%)
Gene name: TT_C1066
Sequence domains: Dodecin
Structure domains: Flavin-binding protein dodecin

Ligands and Environments

2 bound ligands:
Ligand NA 1 x NA
Ligand CL 2 x CL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL26B2
Spacegroup: P41212
Unit cell:
a: 65.171Å b: 65.171Å c: 202.364Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.245 0.243 0.279
Expression system: Escherichia coli

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