› 2di2

Solution NMR

NMR structure of the HIV-2 nucleocapsid protein

Released:
DOI: 10.2210/pdb2di2/pdb
PDB entry 2di2 coloured by chain, ensemble of 13 models, front view.
PDB entry 2di2 coloured by chain, ensemble of 13 models, side view.
PDB entry 2di2 coloured by chain, ensemble of 13 models, top view.
Source organism: synthetic construct
Primary publication:
RNA recognition mechanism of the minimal active domain of the human immunodeficiency virus type-2 nucleocapsid protein.
Matsui T, Kodera Y, Endoh H, Miyauchi E, Komatsu H, Sato K, Tanaka T, Kohno T, Maeda T
J Biochem 141 269-77 (2007)
PMID: 17202191

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-148270 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Nucleocapsid protein p7 Chain: A
Molecule details ›
Chain: A
Length: 29 amino acids
Theoretical weight: 3.35 KDa
Source organism: synthetic construct
Expression system: Not provided
UniProt:
  • Canonical: P18041 (Residues: 384-412; Coverage: 6%)
Gene name: gag
Sequence domains: Zinc knuckle

Ligands and Environments

1 bound ligand:
Ligand ZN 1 x ZN
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: simulated annealing
Expression system: Not provided

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Citations

1 review citation

Zinc Finger Proteins in the Human Fungal Pathogen Cryptococcus neoformans.
Li et al. (2020)
6 other articles