› 2di3

X-ray diffraction
2.05Å resolution

Crystal structure of the transcriptional factor CGL2915 from Corynebacterium glutamicum

Released:
DOI: 10.2210/pdb2di3/pdb
PDB entry 2di3 coloured by chain, front view.
PDB entry 2di3 coloured by chain, side view.
PDB entry 2di3 coloured by chain, top view.
Source organism: Corynebacterium glutamicum
Primary publication:
Structural and functional characterization of the LldR from Corynebacterium glutamicum: a transcriptional repressor involved in L-lactate and sugar utilization.
Gao YG, Suzuki H, Itou H, Zhou Y, Tanaka Y, Wachi M, Watanabe N, Tanaka I, Yao M
Nucleic Acids Res 36 7110-23 (2008)
PMID: 18988622

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-185595 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
HTH gntR-type domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 239 amino acids
Theoretical weight: 26.2 KDa
Source organism: Corynebacterium glutamicum
Expression system: Escherichia coli
UniProt:
  • Canonical: Q8NLM6 (Residues: 1-231; Coverage: 100%)
Gene name: Cgl2915
Sequence domains:
Structure domains:

Ligands and Environments

1 bound ligand:
Ligand ZN 2 x ZN
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: PHOTON FACTORY BEAMLINE BL-6A
Spacegroup: C2221
Unit cell:
a: 95.75Å b: 107.634Å c: 104.838Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.205 0.205 0.25
Expression system: Escherichia coli

Quick links

Citations

7 review citations

Transcriptional regulation of gene expression in Corynebacterium glutamicum: the role of global, master and local regulators in the modular and hierarchical gene regulatory network.
Schröder et al. (2010)
6 more

11 mentions without citation

Genetically encoded tools for measuring and manipulating metabolism.
Choe et al. (2022)
10 more