› 2dkx

Solution NMR

Solution structure of the SAM_PNT-domain of ETS transcription factor PDEF (Prostate ets)

Released:
DOI: 10.2210/pdb2dkx/pdb
PDB entry 2dkx coloured by chain, ensemble of 20 models, front view.
PDB entry 2dkx coloured by chain, ensemble of 20 models, side view.
PDB entry 2dkx coloured by chain, ensemble of 20 models, top view.
Source organism: Homo sapiens
Entry authors: Goroncy AK, Sato M, Koshiba S, Inoue M, Kigawa T, Yokoyama S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-131863 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
SAM pointed domain-containing Ets transcription factor Chain: A
Molecule details ›
Chain: A
Length: 96 amino acids
Theoretical weight: 10.5 KDa
Source organism: Homo sapiens
Expression system: Cell free synthesis
UniProt:
  • Canonical: O95238 (Residues: 131-213; Coverage: 25%)
Gene names: PDEF, PSE, SPDEF
Sequence domains: Sterile alpha motif (SAM)/Pointed domain
Structure domains: Transcription Factor, Ets-1

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: torsion angle dynamics
Expression system: Cell free synthesis

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