› 2dou

X-ray diffraction
2.3Å resolution

probable N-succinyldiaminopimelate aminotransferase (TTHA0342) from Thermus thermophilus HB8

Released:
DOI: 10.2210/pdb2dou/pdb
PDB entry 2dou coloured by chain, front view.
PDB entry 2dou coloured by chain, side view.
PDB entry 2dou coloured by chain, top view.
Source organism: Thermus thermophilus HB8
Entry authors: Omi R, Goto M, Miyahara I, Hirotsu K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-178162 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Aminotransferase Chains: A, B
Molecule details ›
Chains: A, B
Length: 376 amino acids
Theoretical weight: 41.28 KDa
Source organism: Thermus thermophilus HB8
Expression system: Escherichia coli
UniProt:
  • Canonical: Q5SLF1 (Residues: 1-376; Coverage: 100%)
Gene name: TTHA0342
Sequence domains: Aminotransferase class I and II
Structure domains:

Ligands and Environments

2 bound ligands:
Ligand SO4 4 x SO4
Ligand EPE 1 x EPE
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL44B2
Spacegroup: P41212
Unit cell:
a: 121.49Å b: 121.49Å c: 172.19Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.222 0.222 0.254
Expression system: Escherichia coli

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