› 2dst

X-ray diffraction
2Å resolution

Crystal Structure Analysis of TT1977

Released:
DOI: 10.2210/pdb2dst/pdb
PDB entry 2dst coloured by chain, front view.
PDB entry 2dst coloured by chain, side view.
PDB entry 2dst coloured by chain, top view.
Source organism: Thermus thermophilus
Primary publication:
Structure of the minimized alpha/beta-hydrolase fold protein from Thermus thermophilus HB8.
Xie Y, Takemoto C, Kishishita S, Uchikubo-Kamo T, Murayama K, Chen L, Liu ZJ, Wang BC, Manzoku M, Ebihara A, Kuramitsu S, Shirouzu M, Yokoyama S
Acta Crystallogr Sect F Struct Biol Cryst Commun 63 993-7 (2007)
PMID: 18084077

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-177930 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Alpha/beta hydrolase Chains: A, B
Molecule details ›
Chains: A, B
Length: 131 amino acids
Theoretical weight: 14.08 KDa
Source organism: Thermus thermophilus
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q5SI36 (Residues: 1-131; Coverage: 100%)
Gene name: TTHA1544
Structure domains: Rossmann fold

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL26B1, APS BEAMLINE 22-ID
Spacegroup: P21
Unit cell:
a: 31.714Å b: 65.822Å c: 59.32Å
α: 90° β: 92.61° γ: 90°
R-values:
R R work R free
0.201 0.201 0.245
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

2 citation in other articles

Alpha/beta-hydrolases: A unique structural motif coordinates catalytic acid residue in 40 protein fold families.
Dimitriou et al. (2017)
1 more

4 mentions without citation

Echocardiographic Evaluation of Left Atrial Function to Discriminate Non-Valvular Atrial Fibrillation Development in Patients with Apical Hypertrophic Cardiomyopathy.
Kao et al. (2020)
3 more