› 2dt8

X-ray diffraction
1.48Å resolution

Fatty Acid Binding of a DegV family Protein from Thermus thermophilus

Released:
DOI: 10.2210/pdb2dt8/pdb
PDB entry 2dt8 coloured by chain, front view.
PDB entry 2dt8 coloured by chain, side view.
PDB entry 2dt8 coloured by chain, top view.
Source organism: Thermus thermophilus HB8
Entry authors: Rehse PH, Yokoyama S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-178035 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DegV family protein Chain: A
Molecule details ›
Chain: A
Length: 280 amino acids
Theoretical weight: 30.9 KDa
Source organism: Thermus thermophilus HB8
Expression system: Escherichia coli
UniProt:
  • Canonical: Q5SJQ7 (Residues: 1-280; Coverage: 100%)
Gene name: TTHA0951
Sequence domains: Uncharacterised protein, DegV family COG1307
Structure domains:

Ligands and Environments

3 bound ligands:
Ligand ZN 1 x ZN
Ligand PLM 1 x PLM
Ligand GOL 1 x GOL
1 modified residue:
Ligand MSE 3 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL26B2
Spacegroup: C2
Unit cell:
a: 105.548Å b: 36.969Å c: 81.461Å
α: 90° β: 127.065° γ: 90°
R-values:
R R work R free
0.173 0.173 0.197
Expression system: Escherichia coli

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