2ey4

X-ray diffraction
2.11Å resolution

Function and Biology Details

Structure analysis Details

Assemblies composition:
hetero trimer (preferred)
hetero hexamer
PDBe Complex ID:
PDB-CPX-181661 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
Probable tRNA pseudouridine synthase B Chains: A, B
Molecule details ›
Chains: A, B
Length: 333 amino acids
Theoretical weight: 37.66 KDa
Source organism: Pyrococcus furiosus
Expression system: Escherichia coli
UniProt:
  • Canonical: Q7LWY0 (Residues: 1-333; Coverage: 98%)
Gene names: PF1785, truB
Sequence domains:
Structure domains:
Small nucleolar rnp gar1-like protein Chains: C, D
Molecule details ›
Chains: C, D
Length: 82 amino acids
Theoretical weight: 9.51 KDa
Source organism: Pyrococcus furiosus DSM 3638
Expression system: Escherichia coli
UniProt:
  • Canonical: Q8U029 (Residues: 1-82; Coverage: 79%)
Gene name: PF1791
Sequence domains: Gar1/Naf1 RNA binding region
Structure domains: Probable tRNA pseudouridine synthase domain
Ribosome biogenesis protein Nop10 Chains: E, F
Molecule details ›
Chains: E, F
Length: 55 amino acids
Theoretical weight: 6.64 KDa
Source organism: Pyrococcus furiosus
Expression system: Escherichia coli
UniProt:
  • Canonical: Q8U1R4 (Residues: 1-55; Coverage: 92%)
Gene names: PF1141, nop10
Sequence domains: Nucleolar RNA-binding protein, Nop10p family
Structure domains: H/ACA ribonucleoprotein complex, subunit Nop10

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 22-ID, APS BEAMLINE 8-BM
Spacegroup: P1
Unit cell:
a: 36.087Å b: 75.361Å c: 103.24Å
α: 95.9° β: 96.9° γ: 94.99°
R-values:
R R work R free
0.211 0.211 0.255
Expression system: Escherichia coli