2fj2

X-ray diffraction
2.3Å resolution

Crystal Structure of Viral Macrophage Inflammatory Protein-II

Released:
Primary publication:
Crystal structure of chemically synthesized vMIP-II.
Proteins 67 243-6 (2007)
PMID: 17243149

Function and Biology Details

Structure analysis Details

Assembly composition:
homo dimer (preferred)
PDBe Complex ID:
PDB-CPX-189108 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Viral macrophage inflammatory protein 2 Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 71 amino acids
Theoretical weight: 8.14 KDa
Source organism: Human herpesvirus 8 strain GK18
Expression system: Not provided
UniProt:
  • Canonical: Q98157 (Residues: 24-94; Coverage: 96%)
Gene name: ORF K4
Sequence domains: Small cytokines (intecrine/chemokine), interleukin-8 like
Structure domains: OB fold (Dihydrolipoamide Acetyltransferase, E2P)

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X12C, null
Spacegroup: P21
Unit cell:
a: 45.65Å b: 65.77Å c: 45.62Å
α: 90° β: 91.62° γ: 90°
R-values:
R R work R free
0.257 not available 0.301
Expression system: Not provided