› 2fn8

X-ray diffraction
2.15Å resolution

Thermotoga maritima Ribose Binding Protein Ribose Bound Form

Released:
DOI: 10.2210/pdb2fn8/pdb
PDB entry 2fn8 coloured by chain, front view.
PDB entry 2fn8 coloured by chain, side view.
PDB entry 2fn8 coloured by chain, top view.
Source organism: Thermotoga maritima MSB8
Primary publication:
Ligand-induced conformational changes in a thermophilic ribose-binding protein.
Cuneo MJ, Beese LS, Hellinga HW
BMC Struct Biol 8 50 (2008)
PMID: 19019243

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-194678 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Periplasmic binding protein domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 303 amino acids
Theoretical weight: 33.83 KDa
Source organism: Thermotoga maritima MSB8
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9X053 (Residues: 30-323; Coverage: 98%)
Gene name: TM_0958
Sequence domains: Periplasmic binding protein domain
Structure domains: Rossmann fold

Ligands and Environments

1 bound ligand:
Ligand RIP 1 x RIP
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 22-ID
Spacegroup: I222
Unit cell:
a: 72.07Å b: 98.242Å c: 131.099Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.194 0.193 0.223
Expression system: Escherichia coli

Quick links

Citations

19 citation in other articles

fpocket: online tools for protein ensemble pocket detection and tracking.
Schmidtke et al. (2010)
18 more

2 mentions without citation

Ligand-induced conformational changes in a thermophilic ribose-binding protein.
Cuneo et al. (2008)
1 more