› 2fy1

Solution NMR

A dual mode of RNA recognition by the RBMY protein

Released:
DOI: 10.2210/pdb2fy1/pdb
PDB entry 2fy1 coloured by chain, ensemble of 17 models, front view.
PDB entry 2fy1 coloured by chain, ensemble of 17 models, side view.
PDB entry 2fy1 coloured by chain, ensemble of 17 models, top view.
Source organisms:
Primary publication:
The testis-specific human protein RBMY recognizes RNA through a novel mode of interaction.
Skrisovska L, Bourgeois CF, Stefl R, Grellscheid SN, Kister L, Wenter P, Elliott DJ, Stevenin J, Allain FH
EMBO Rep 8 372-9 (2007)
PMID: 17318228

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-143584 (preferred)
Entry contents:
1 distinct polypeptide molecule
1 distinct RNA molecule
Macromolecules (2 distinct):
RNA-binding motif protein, Y chromosome, family 1 member A1 Chain: A
Molecule details ›
Chain: A
Length: 116 amino acids
Theoretical weight: 12.81 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P0DJD3 (Residues: 1-109; Coverage: 22%)
Gene names: RBM1, RBM2, RBMY1A1, YRRM1, YRRM2
Sequence domains: RNA recognition motif
Structure domains: Alpha-Beta Plaits
S1A stem-loop RNA Chain: B
Molecule details ›
Chain: B
Length: 21 nucleotides
Theoretical weight: 6.71 KDa
Source organism: synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Expression systems:
  • Escherichia coli
  • Not provided

Quick links

Citations

17 review citations

RNA recognition motifs: boring? Not quite.
Cléry et al. (2008)
16 more

11 mentions without citation

Towards deciphering the principles underlying an mRNA recognition code.
Serganov et al. (2008)
10 more