› 2gkp

X-ray diffraction
1.35Å resolution

Protein of Unknown Function NMB0488 from Neisseria meningitidis

Released:
DOI: 10.2210/pdb2gkp/pdb
PDB entry 2gkp coloured by chain, front view.
PDB entry 2gkp coloured by chain, side view.
PDB entry 2gkp coloured by chain, top view.
Source organism: Neisseria meningitidis MC58
Entry authors: Osipiuk J, Volkart L, Bargassa M, Joachimiak A, Midwest Center for Structural Genomics (MCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-191730 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DUF1436 domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 167 amino acids
Theoretical weight: 19.28 KDa
Source organism: Neisseria meningitidis MC58
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q9K0T5 (Residues: 1-164; Coverage: 100%)
Gene name: NMB0488
Sequence domains: CDI immunity protein
Structure domains: NMB0488-like

Ligands and Environments

3 bound ligands:
Ligand NA 1 x NA
Ligand EDO 1 x EDO
Ligand BME 1 x BME
1 modified residue:
Ligand MSE 3 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-BM
Spacegroup: P21212
Unit cell:
a: 48.102Å b: 79.877Å c: 44.624Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.154 0.154 0.206
Expression system: Escherichia coli BL21(DE3)

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