› 2gmy

X-ray diffraction
1.6Å resolution

Crystal Structure of a Protein of Unknown Function ATU0492 from Agrobacterium tumefaciens, Putative Antioxidant Defence Protein AhpD

Released:
DOI: 10.2210/pdb2gmy/pdb
PDB entry 2gmy coloured by chain, front view.
PDB entry 2gmy coloured by chain, side view.
PDB entry 2gmy coloured by chain, top view.
Source organism: Agrobacterium fabrum str. C58
Entry authors: Zhang R, Xu X, Gu J, Savchenko A, Edwards A, Joachimiak A, Midwest Center for Structural Genomics (MCSG)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo hexamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-181464 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Carboxymuconolactone decarboxylase-like domain-containing protein Chains: A, B, C, D, E, F
Molecule details ›
Chains: A, B, C, D, E, F
Length: 153 amino acids
Theoretical weight: 17.13 KDa
Source organism: Agrobacterium fabrum str. C58
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q7D1C9 (Residues: 1-153; Coverage: 100%)
Gene name: Atu0492
Sequence domains: Carboxymuconolactone decarboxylase family
Structure domains: AhpD-like

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P31
Unit cell:
a: 75.009Å b: 75.009Å c: 148.755Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.168 0.167 0.191
Expression system: Escherichia coli BL21(DE3)

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