› 2gxf

X-ray diffraction
3.1Å resolution

X-Ray Crystal Structure of Protein YybH from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR506.

Released:
DOI: 10.2210/pdb2gxf/pdb
PDB entry 2gxf coloured by chain, front view.
PDB entry 2gxf coloured by chain, side view.
PDB entry 2gxf coloured by chain, top view.
Source organism: Bacillus subtilis
Entry authors: Forouhar F, Abashidze M, Jayaraman S, Cunningham K, Fang Y, Ma L-C, Xiao R, Acton TB, Montelione GT, Hunt JF, Tong L, Northeast Structural Genomics Consortium (NESG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-153418 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Hypothetical protein yybH Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 142 amino acids
Theoretical weight: 16.41 KDa
Source organism: Bacillus subtilis
Expression system: Escherichia coli
UniProt:
  • Canonical: P37496 (Residues: 1-129; Coverage: 100%)
Gene names: BSU40640, yybH
Sequence domains: SnoaL-like domain
Structure domains: Nuclear Transport Factor 2; Chain: A,

Ligands and Environments

1 bound ligand:
Ligand MES 4 x MES
1 modified residue:
Ligand MSE 24 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X4A
Spacegroup: P41
Unit cell:
a: 88.251Å b: 88.251Å c: 82.836Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.261 0.259 0.286
Expression system: Escherichia coli

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