› 2gzq

X-ray diffraction
1.3Å resolution

Phosphatidylethanolamine-binding protein from Plasmodium vivax

Released:
DOI: 10.2210/pdb2gzq/pdb
PDB entry 2gzq coloured by chain, front view.
PDB entry 2gzq coloured by chain, side view.
PDB entry 2gzq coloured by chain, top view.
Source organism: Plasmodium vivax
Primary publication:
The structure of Plasmodium vivax phosphatidylethanolamine-binding protein suggests a functional motif containing a left-handed helix.
Arakaki T, Neely H, Boni E, Mueller N, Buckner FS, Van Voorhis WC, Lauricella A, DeTitta G, Luft J, Hol WG, Merritt EA
Acta Crystallogr Sect F Struct Biol Cryst Commun 63 178-82 (2007)
PMID: 17329808

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107653 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Phosphatidylethanolamine-binding protein, putative Chain: A
Molecule details ›
Chain: A
Length: 200 amino acids
Theoretical weight: 23.3 KDa
Source organism: Plasmodium vivax
Expression system: Escherichia coli
UniProt:
  • Canonical: A5K000 (Residues: 1-189; Coverage: 99%)
Gene name: PVX_123630
Sequence domains: Phosphatidylethanolamine-binding protein
Structure domains: PEBP-like

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 7 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 8.2.2
Spacegroup: P212121
Unit cell:
a: 39.309Å b: 54.11Å c: 94.377Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.161 0.161 0.18
Expression system: Escherichia coli

Quick links

Citations

1 review citation

Florigen and its homologs of FT/CETS/PEBP/RKIP/YbhB family may be the enzymes of small molecule metabolism: review of the evidence.
Tsoy et al. (2022)
3 other articles

6 mentions without citation

Is it time for artificial intelligence to predict the function of natural products based on 2D-structure.
Liu et al. (2019)
5 more