› 2hi5

Electron Microscopy
8Å resolution

Model for bacteriophage fd from cryo-EM

Released:
DOI: 10.2210/pdb2hi5/pdb
PDB entry 2hi5 coloured by chain, front view.
PDB entry 2hi5 coloured by chain, side view.
PDB entry 2hi5 coloured by chain, top view.
Source organism: Enterobacteria phage fd
Primary publication:
The structure of a filamentous bacteriophage.
Wang YA, Yu X, Overman S, Tsuboi M, Thomas GJ, Egelman EH
J Mol Biol 361 209-15 (2006)
PMID: 16843489
Related structures: EMD-1240

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo 55-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-159610 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Capsid protein G8P Chain: A
Molecule details ›
Chain: A
Length: 50 amino acids
Theoretical weight: 5.24 KDa
Source organism: Enterobacteria phage fd
Expression system: Escherichia coli
UniProt:
  • Canonical: P69539 (Residues: 24-73; Coverage: 100%)
Gene name: VIII
Sequence domains: Phage major coat protein, Gp8

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 8Å
Relevant EMDB volumes: EMD-1240
Expression system: Escherichia coli

Quick links

Citations

12 review citations

Bacteriophage based probes for pathogen detection.
Singh et al. (2012)
11 more

2 mentions without citation

Cryo-electron microscopy structure of the filamentous bacteriophage IKe.
Xu et al. (2019)
1 more