› 2hrz

X-ray diffraction
1.85Å resolution

The crystal structure of the nucleoside-diphosphate-sugar epimerase from Agrobacterium tumefaciens

Released:
DOI: 10.2210/pdb2hrz/pdb
PDB entry 2hrz coloured by chain, front view.
PDB entry 2hrz coloured by chain, side view.
PDB entry 2hrz coloured by chain, top view.
Source organism: Agrobacterium fabrum str. C58
Entry authors: Zhang R, Xu X, Zheng H, Savchenko A, Edwards A, Joachimiak A, Midwest Center for Structural Genomics (MCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-108871 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
NAD-dependent epimerase/dehydratase domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 342 amino acids
Theoretical weight: 37.56 KDa
Source organism: Agrobacterium fabrum str. C58
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A9CHF5 (Residues: 1-328; Coverage: 100%)
Gene name: Atu2738
Sequence domains: NAD dependent epimerase/dehydratase family
Structure domains:

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 7 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P3121
Unit cell:
a: 112.893Å b: 112.893Å c: 52.765Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.186 0.185 0.225
Expression system: Escherichia coli BL21(DE3)

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