2ij0

X-ray diffraction
2.25Å resolution

Structural basis of T cell specificity and activation by the bacterial superantigen toxic shock syndrome toxin-1

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero tetramer (preferred)
PDBe Complex ID:
PDB-CPX-105318 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Toxic shock syndrome toxin-1 Chains: A, B
Molecule details ›
Chains: A, B
Length: 194 amino acids
Theoretical weight: 22.1 KDa
Source organism: Staphylococcus aureus
Expression system: Escherichia coli
UniProt:
  • Canonical: P06886 (Residues: 41-234; Coverage: 100%)
Gene name: tst
Structure domains:
Ig-like domain-containing protein Chains: C, E
Molecule details ›
Chains: C, E
Length: 118 amino acids
Theoretical weight: 12.8 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A5B4 (Residues: 15-110; Coverage: 99%)
Gene names: TCRBV2S1, TRBV20-1
Sequence domains: Immunoglobulin V-set domain
Structure domains: Immunoglobulins

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: CHESS BEAMLINE F2
Spacegroup: C2
Unit cell:
a: 190.898Å b: 68.372Å c: 53.549Å
α: 90° β: 106.24° γ: 90°
R-values:
R R work R free
0.242 0.242 0.252
Expression system: Escherichia coli