› 2im9

X-ray diffraction
1.67Å resolution

Crystal structure of protein LPG0564 from Legionella pneumophila str. Philadelphia 1, Pfam DUF1460

Released:
DOI: 10.2210/pdb2im9/pdb
PDB entry 2im9 coloured by chain, front view.
PDB entry 2im9 coloured by chain, side view.
PDB entry 2im9 coloured by chain, top view.
Source organism: Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Entry authors: Bonanno JB, Freeman J, Bain KT, Powell A, Ozyurt S, Wasserman S, Sauder JM, Burley SK, Almo SC, New York SGX Research Center for Structural Genomics (NYSGXRC)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-178716 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DUF1460 domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 333 amino acids
Theoretical weight: 37.95 KDa
Source organism: Legionella pneumophila subsp. pneumophila str. Philadelphia 1
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q5ZY11 (Residues: 26-356; Coverage: 100%)
Gene name: lpg0564
Sequence domains: N-acetylmuramoyl-L-alanine amidase-like
Structure domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X29A
Spacegroup: P212121
Unit cell:
a: 48.892Å b: 71.052Å c: 83.904Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.173 0.172 0.212
Expression system: Escherichia coli BL21(DE3)

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