› 2in5

X-ray diffraction
2.3Å resolution

Crystal Structure of the hypothetical lipoprotein YmcC from Escherichia coli (K12), Northeast Structural Genomics target ER552.

Released:
DOI: 10.2210/pdb2in5/pdb
PDB entry 2in5 coloured by chain, front view.
PDB entry 2in5 coloured by chain, side view.
PDB entry 2in5 coloured by chain, top view.
Source organism: Escherichia coli K-12
Entry authors: Zhou W, Forouhar F, Seetharaman J, Chen CX, Cunningham K, Ma L-C, Janjua H, Xiao R, Baran MC, Acton TB, Montelione GT, Tong L, Hunt JF, Northeast Structural Genomics Consortium (NESG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-160017 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Uncharacterized lipoprotein GfcB Chains: A, B
Molecule details ›
Chains: A, B
Length: 207 amino acids
Theoretical weight: 24.02 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli
UniProt:
  • Canonical: P75884 (Residues: 17-214; Coverage: 100%)
Gene names: JW0969, b0986, gfcB, ymcC
Sequence domains: Group 4 capsule polysaccharide lipoprotein gfcB, YjbF
Structure domains: YmcC-like

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 12 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X4A
Spacegroup: C2
Unit cell:
a: 122.793Å b: 74.998Å c: 80.201Å
α: 90° β: 127.11° γ: 90°
R-values:
R R work R free
0.22 0.215 0.256
Expression system: Escherichia coli

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