› 2jin

X-ray diffraction
1.5Å resolution

Crystal structure of PDZ domain of Synaptojanin-2 binding protein

Released:
DOI: 10.2210/pdb2jin/pdb
PDB entry 2jin coloured by chain, front view.
PDB entry 2jin coloured by chain, side view.
PDB entry 2jin coloured by chain, top view.
Source organism: Homo sapiens
Entry authors: Tickle J, Phillips C, Pike ACW, Cooper C, Salah E, Elkins J, Turnbull AP, Edwards A, Arrowsmith CH, Weigelt J, Sundstrom M, Doyle D

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-157606 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Synaptojanin-2-binding protein Chain: A
Molecule details ›
Chain: A
Length: 102 amino acids
Theoretical weight: 11.18 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P57105 (Residues: 4-99; Coverage: 66%)
Gene names: OMP25, SYNJ2BP
Sequence domains: PDZ domain
Structure domains: Pdz3 Domain

Ligands and Environments

2 bound ligands:
Ligand NA 1 x NA
Ligand SO4 1 x SO4
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SLS BEAMLINE X10SA
Spacegroup: I4
Unit cell:
a: 65.993Å b: 65.993Å c: 41.384Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.169 0.166 0.22
Expression system: Escherichia coli BL21(DE3)

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