› 2k39

Solution NMR

Recognition dynamics up to microseconds revealed from RDC derived ubiquitin ensemble in solution

Released:
DOI: 10.2210/pdb2k39/pdb
PDB entry 2k39 coloured by chain, ensemble of 116 models, front view.
PDB entry 2k39 coloured by chain, ensemble of 116 models, side view.
PDB entry 2k39 coloured by chain, ensemble of 116 models, top view.
Source organism: Xenopus laevis
Primary publication:
Recognition dynamics up to microseconds revealed from an RDC-derived ubiquitin ensemble in solution.
Lange OF, Lakomek NA, Farès C, Schröder GF, Walter KF, Becker S, Meiler J, Grubmüller H, Griesinger C, de Groot BL
Science 320 1471-5 (2008)
PMID: 18556554

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-158820 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Ubiquitin Chain: A
Molecule details ›
Chain: A
Length: 76 amino acids
Theoretical weight: 8.58 KDa
Source organism: Xenopus laevis
Expression system: Escherichia coli
UniProt:
  • Canonical: P62972 (Residues: 92-167; Coverage: 46%)
Sequence domains: Ubiquitin family
Structure domains: Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: simulated annealing
Expression system: Escherichia coli

Quick links

Citations

107 review citations

The ubiquitin code.
Komander et al. (2012)
106 more

23 mentions without citation

NMR studies of dynamic biomolecular conformational ensembles.
Torchia DA. (2015)
22 more