› 2kd8

Solution NMR

Solution structure of the stem-loop IIId of GBV-B IRES

Released:
DOI: 10.2210/pdb2kd8/pdb
PDB entry 2kd8 coloured by chain, ensemble of 12 models, front view.
PDB entry 2kd8 coloured by chain, ensemble of 12 models, side view.
PDB entry 2kd8 coloured by chain, ensemble of 12 models, top view.
Source organism: Synthetic construct
Entry authors: Thiviyanathan V, Kulasegran Shylini R, Gorenstein DG, kaluarachchi K

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-196417 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
5'-R(*GP*GP*AP*UP*GP*GP*UP*UP*GP*GP*GP*GP*UP*UP*AP*GP*CP*CP*AP*UP*CP*C)-3' Chain: A
Molecule details ›
Chain: A
Length: 22 nucleotides
Theoretical weight: 7.11 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: distance geometry, molecular dynamics, matrix relaxation
Expression system: Not provided

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