› 2l7c

Solution NMR

Biophysical studies of lipid interacting regions of DGD2 in Arabidopsis thaliana

Released:
DOI: 10.2210/pdb2l7c/pdb
PDB entry 2l7c coloured by chain, ensemble of 23 models, front view.
PDB entry 2l7c coloured by chain, ensemble of 23 models, side view.
PDB entry 2l7c coloured by chain, ensemble of 23 models, top view.
Source organism: Arabidopsis thaliana
Primary publication:
Lipid interacting regions in phosphate stress glycosyltransferase atDGD2 from Arabidopsis thaliana.
Szpryngiel S, Ge C, Iakovleva I, Georgiev A, Lind J, Wieslander A, Mäler L
Biochemistry 50 4451-66 (2011)
PMID: 21506606

Function and Biology Details

Reaction catalysed: 
UDP-alpha-D-galactose + 3-(beta-D-galactosyl)-1,2-diacyl-sn-glycerol = UDP + 3-(alpha-D-galactosyl-(1->6)-beta-D-galactosyl)-1,2-diacyl-sn-glycerol
Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-186657 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Digalactosyldiacylglycerol synthase 2, chloroplastic Chain: A
Molecule details ›
Chain: A
Length: 19 amino acids
Theoretical weight: 2.23 KDa
Source organism: Arabidopsis thaliana
Expression system: Not provided
UniProt:
  • Canonical: Q8W1S1 (Residues: 227-245; Coverage: 4%)
Gene names: At4g00550, DGD2, F6N23.24

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Chemical shift assignment: 41%
Refinement method: torsion angle dynamics
Expression system: Not provided

Quick links

Citations

2 review citations

Structure-function relationships of membrane-associated GT-B glycosyltransferases.
Albesa-Jové et al. (2014)
1 more