› 2m12

Solution NMR

Solution structure of the ID3 stem loop of domain 1 of the ai5gamma group II intron

Released:
DOI: 10.2210/pdb2m12/pdb
PDB entry 2m12 coloured by chain, ensemble of 10 models, front view.
PDB entry 2m12 coloured by chain, ensemble of 10 models, side view.
PDB entry 2m12 coloured by chain, ensemble of 10 models, top view.
Source organism: Synthetic construct
Primary publication:
Role of helical constraints of the EBS1-IBS1 duplex of a group II intron on demarcation of the 5' splice site.
Popovic M, Greenbaum NL
RNA 20 24-35 (2014)
PMID: 24243113

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-196482 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
RNA (5'-R(*GP*GP*GP*UP*GP*UP*AP*UP*UP*GP*GP*AP*AP*AP*UP*GP*AP*GP*CP*AP*CP*CP*C)-3') Chain: A
Molecule details ›
Chain: A
Length: 23 nucleotides
Theoretical weight: 7.44 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Chemical shift assignment: 31%
Refinement method: torsion angle dynamics
Expression system: Not provided

Quick links

Citations

1 review citation

NMR Studies of the Structure and Function of the HIV-1 5'-Leader.
Keane et al. (2016)
4 other articles

2 mentions without citation

Role of helical constraints of the EBS1-IBS1 duplex of a group II intron on demarcation of the 5' splice site.
Popovic et al. (2014)
1 more