2m1c

Solution NMR

HADDOCK structure of GtYybT PAS Homodimer

Released:

Function and Biology Details

Reaction catalysed:
Cyclic di-3',5'-adenylate + H(2)O = 5'-O-phosphonoadenylyl-(3'->5')-adenosine
Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
PDBe Complex ID:
PDB-CPX-107352 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Cyclic-di-AMP phosphodiesterase GdpP Chains: A, B
Molecule details ›
Chains: A, B
Length: 113 amino acids
Theoretical weight: 13.21 KDa
Source organism: Geobacillus thermodenitrificans NG80-2
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A4ITV2 (Residues: 55-162; Coverage: 16%)
Gene names: GTNG_3419, gdpP, yybT
Sequence domains: Cyclic-di-AMP phosphodiesterase GdpP, PAS domain
Structure domains: PAS domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Chemical shift assignment: 45%
Expression system: Escherichia coli BL21(DE3)