› 2o6r

X-ray diffraction
2.3Å resolution

Structural diversity of the hagfish Variable Lymphocyte Receptors B61

Released:
DOI: 10.2210/pdb2o6r/pdb
PDB entry 2o6r coloured by chain, front view.
PDB entry 2o6r coloured by chain, side view.
PDB entry 2o6r coloured by chain, top view.
Source organism: Eptatretus burgeri
Primary publication:
Structural diversity of the hagfish variable lymphocyte receptors.
Kim HM, Oh SC, Lim KJ, Kasamatsu J, Heo JY, Park BS, Lee H, Yoo OJ, Kasahara M, Lee JO
J Biol Chem 282 6726-32 (2007)
PMID: 17192264

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-175538 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
LRRNT domain-containing protein Chain: A
Molecule details ›
Chain: A
Length: 177 amino acids
Theoretical weight: 19.65 KDa
Source organism: Eptatretus burgeri
Expression system: Spodoptera frugiperda
UniProt:
  • Canonical: Q4G1L2 (Residues: 24-200; Coverage: 71%)
Gene name: VLRB
Sequence domains:
Structure domains: Ribonuclease Inhibitor

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: PAL/PLS BEAMLINE 4A
Spacegroup: P212121
Unit cell:
a: 42.774Å b: 55.355Å c: 81.06Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.212 0.191 0.259
Expression system: Spodoptera frugiperda

Quick links

Citations

24 review citations

Origin and evolution of the adaptive immune system: genetic events and selective pressures.
Flajnik et al. (2010)
23 more

5 mentions without citation

Antigen recognition by variable lymphocyte receptors.
Han et al. (2008)
4 more