2ocv

X-ray diffraction
2.2Å resolution

Structural basis of Na+ activation mimicry in murine thrombin

Released:
Source organism: Mus musculus

Function and Biology Details

Structure analysis Details

Assemblies composition:
hetero dimer (preferred)
hetero tetramer
Assembly name:
PDBe Complex ID:
PDB-CPX-148522 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (3 distinct):
Thrombin light chain Chain: A
Molecule details ›
Chain: A
Length: 42 amino acids
Theoretical weight: 4.82 KDa
Source organism: Mus musculus
Expression system: Not provided
UniProt:
  • Canonical: P19221 (Residues: 319-360; Coverage: 7%)
Gene names: Cf2, F2
Sequence domains: Thrombin light chain
Thrombin heavy chain Chain: B
Molecule details ›
Chain: B
Length: 259 amino acids
Theoretical weight: 30.01 KDa
Source organism: Mus musculus
Expression system: Not provided
UniProt:
  • Canonical: P19221 (Residues: 361-618; Coverage: 43%)
Gene names: Cf2, F2
Sequence domains: Trypsin
Structure domains: Trypsin-like serine proteases

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG
1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 14-BM-C
Spacegroup: C2
Unit cell:
a: 136.77Å b: 47.51Å c: 43.18Å
α: 90° β: 95.54° γ: 90°
R-values:
R R work R free
0.186 0.186 0.246
Expression system: Not provided