› 2osd

X-ray diffraction
2.3Å resolution

Crystal structure of a vinyl-4-reductase family protein (mj_1460) from methanocaldococcus jannaschii dsm at 2.40 A resolution

Released:
DOI: 10.2210/pdb2osd/pdb
PDB entry 2osd coloured by chain, front view.
PDB entry 2osd coloured by chain, side view.
PDB entry 2osd coloured by chain, top view.
Source organism: Methanocaldococcus jannaschii DSM 2661
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-176699 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Hypothetical protein MJ1460 Chain: A
Molecule details ›
Chain: A
Length: 163 amino acids
Theoretical weight: 19.2 KDa
Source organism: Methanocaldococcus jannaschii DSM 2661
Expression system: Escherichia coli
UniProt:
  • Canonical: Q58855 (Residues: 1-162; Coverage: 100%)
Gene name: MJ1460
Sequence domains: V4R domain
Structure domains: Trafficking protein particle complex subunit 3

Ligands and Environments

4 bound ligands:
Ligand CA 2 x CA
Ligand CL 1 x CL
Ligand ZN 1 x ZN
Ligand EDO 3 x EDO
1 modified residue:
Ligand MSE 5 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: P43212
Unit cell:
a: 55.786Å b: 55.786Å c: 118.99Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.221 0.219 0.242
Expression system: Escherichia coli

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