› 2ot9

X-ray diffraction
1.97Å resolution

Crystal structure of YaeQ protein from Pseudomonas syringae

Released:
DOI: 10.2210/pdb2ot9/pdb
PDB entry 2ot9 coloured by chain, front view.
PDB entry 2ot9 coloured by chain, side view.
PDB entry 2ot9 coloured by chain, top view.
Source organism: Pseudomonas syringae pv. tomato str. DC3000
Entry authors: Wu R, Clancy S, Joachimiak A, Midwest Center for Structural Genomics (MCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-183426 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
YaeQ family protein Chain: A
Molecule details ›
Chain: A
Length: 180 amino acids
Theoretical weight: 20.9 KDa
Source organism: Pseudomonas syringae pv. tomato str. DC3000
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: Q886T9 (Residues: 1-180; Coverage: 100%)
Gene name: PSPTO_1487
Sequence domains: YaeQ protein
Structure domains: Restriction endonuclease-like alpha-beta roll domain

Ligands and Environments

2 bound ligands:
Ligand NA 1 x NA
Ligand SRT 1 x SRT
1 modified residue:
Ligand MSE 3 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P212121
Unit cell:
a: 40.311Å b: 61.405Å c: 77.828Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.18 0.178 0.239
Expression system: Escherichia coli BL21

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