› 2oyo

X-ray diffraction
1.51Å resolution

Crystal structure of Uncharacterized peroxidase-related protein (YP_604910.1) from Deinococcus geothermalis DSM 11300 at 1.51 A resolution

Released:
DOI: 10.2210/pdb2oyo/pdb
PDB entry 2oyo coloured by chain, front view.
PDB entry 2oyo coloured by chain, side view.
PDB entry 2oyo coloured by chain, top view.
Source organism: Deinococcus geothermalis DSM 11300
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo hexamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-172893 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Carboxymuconolactone decarboxylase-like domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 196 amino acids
Theoretical weight: 21.91 KDa
Source organism: Deinococcus geothermalis DSM 11300
Expression system: Escherichia coli
UniProt:
  • Canonical: Q1IYE3 (Residues: 1-195; Coverage: 100%)
Gene name: Dgeo_1446
Sequence domains: Carboxymuconolactone decarboxylase family
Structure domains:

Ligands and Environments

1 bound ligand:
Ligand MPD 3 x MPD
1 modified residue:
Ligand MSE 6 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: R32
Unit cell:
a: 135.649Å b: 135.649Å c: 118.084Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.184 0.182 0.215
Expression system: Escherichia coli

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