› 2p7h

X-ray diffraction
1.85Å resolution

Crystal structure of a sam dependent methyl-transferase type 12 family protein (eca1738) from pectobacterium atrosepticum scri1043 at 1.85 A resolution

Released:
DOI: 10.2210/pdb2p7h/pdb
PDB entry 2p7h coloured by chain, front view.
PDB entry 2p7h coloured by chain, side view.
PDB entry 2p7h coloured by chain, top view.
Source organism: Pectobacterium atrosepticum SCRI1043
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:
Structure domain:

Structure analysis Details

Assemblies composition:
homo tetramer (preferred)
homo hexadecamer
homo octamer
Assembly name:
PDBe Complex ID:
PDB-CPX-179496 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Methyltransferase Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 250 amino acids
Theoretical weight: 28.69 KDa
Source organism: Pectobacterium atrosepticum SCRI1043
Expression system: Escherichia coli
UniProt:
  • Canonical: Q6D6E7 (Residues: 1-249; Coverage: 100%)
Gene name: ECA1738
Sequence domains: Methyltransferase domain
Structure domains: Vaccinia Virus protein VP39

Ligands and Environments

4 bound ligands:
Ligand CL 5 x CL
Ligand TRS 4 x TRS
Ligand EDO 7 x EDO
Ligand NA 2 x NA
1 modified residue:
Ligand MSE 16 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: P4212
Unit cell:
a: 117.949Å b: 117.949Å c: 150.532Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.15 0.149 0.183
Expression system: Escherichia coli

Quick links