› 2pdr

X-ray diffraction
1.7Å resolution

1.7 Angstrom Crystal Structure of the Photo-excited Blue-light Photoreceptor Vivid

Released:
DOI: 10.2210/pdb2pdr/pdb
PDB entry 2pdr coloured by chain, front view.
PDB entry 2pdr coloured by chain, side view.
PDB entry 2pdr coloured by chain, top view.
Source organism: Neurospora crassa
Primary publication:
Conformational switching in the fungal light sensor Vivid.
Zoltowski BD, Schwerdtfeger C, Widom J, Loros JJ, Bilwes AM, Dunlap JC, Crane BR
Science 316 1054-7 (2007)
PMID: 17510367

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-189904 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
PAS domain-containing protein Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 149 amino acids
Theoretical weight: 17 KDa
Source organism: Neurospora crassa
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q9C3Y6 (Residues: 36-184; Coverage: 80%)
Gene names: G17A4.050, vvd
Sequence domains: PAS domain
Structure domains: PAS domain

Ligands and Environments

1 bound ligand:
Ligand FAD 4 x FAD
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X29A
Spacegroup: P21
Unit cell:
a: 62.97Å b: 81.13Å c: 64.73Å
α: 90° β: 89.94° γ: 90°
R-values:
R R work R free
0.23 0.226 0.249
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

66 review citations

Structure and signaling mechanism of Per-ARNT-Sim domains.
Möglich et al. (2009)
65 more

5 mentions without citation

Flavin redox switching of protein functions.
Becker et al. (2011)
4 more