› 2pkv

X-ray diffraction
1.6Å resolution

D-(GGTATACC) ambient pressure

Released:
DOI: 10.2210/pdb2pkv/pdb
PDB entry 2pkv coloured by chain, front view.
PDB entry 2pkv coloured by chain, side view.
PDB entry 2pkv coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
Adaptation of the base-paired double-helix molecular architecture to extreme pressure.
Girard E, Prangé T, Dhaussy AC, Migianu-Griffoni E, Lecouvey M, Chervin JC, Mezouar M, Kahn R, Fourme R
Nucleic Acids Res 35 4800-8 (2007)
PMID: 17617642

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-115770 (preferred)
Entry contents:
1 distinct DNA molecule
Macromolecule:
5'-D(*GP*GP*TP*AP*TP*AP*CP*C)-3' Chains: A, B
Molecule details ›
Chains: A, B
Length: 8 nucleotides
Theoretical weight: 2.43 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID27
Spacegroup: P61
Unit cell:
a: 45.03Å b: 45.03Å c: 41.75Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.158 0.149 0.189
Expression system: Not provided

Quick links

Citations

8 review citations

Biotechnology under high pressure: applications and implications.
Aertsen et al. (2009)
7 more