› 2prv

X-ray diffraction
1.3Å resolution

Crystal structure of an uncharacterized protein (yobk, bsu18990) from bacillus subtilis at 1.30 A resolution

Released:
DOI: 10.2210/pdb2prv/pdb
PDB entry 2prv coloured by chain, front view.
PDB entry 2prv coloured by chain, side view.
PDB entry 2prv coloured by chain, top view.
Source organism: Bacillus subtilis
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-128562 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Immunity protein YobK Chains: A, B
Molecule details ›
Chains: A, B
Length: 153 amino acids
Theoretical weight: 17.88 KDa
Source organism: Bacillus subtilis
Expression system: Escherichia coli
UniProt:
  • Canonical: O34596 (Residues: 1-152; Coverage: 100%)
Gene names: BSU18990, yobK
Sequence domains: SMI1-KNR4 cell-wall
Structure domains: SMI1/KNR4-like

Ligands and Environments

2 bound ligands:
Ligand SO4 2 x SO4
Ligand EDO 15 x EDO
1 modified residue:
Ligand MSE 4 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: P1
Unit cell:
a: 40.128Å b: 45.2Å c: 48.083Å
α: 84.54° β: 67.52° γ: 73.12°
R-values:
R R work R free
0.137 0.135 0.175
Expression system: Escherichia coli

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