› 2q03

X-ray diffraction
1.8Å resolution

Crystal structure of uncharacterized protein (YP_563039.1) from Shewanella denitrificans OS217 at 1.80 A resolution

Released:
DOI: 10.2210/pdb2q03/pdb
PDB entry 2q03 coloured by chain, front view.
PDB entry 2q03 coloured by chain, side view.
PDB entry 2q03 coloured by chain, top view.
Source organism: Shewanella denitrificans OS217
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-171489 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DUF3224 domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 138 amino acids
Theoretical weight: 15.37 KDa
Source organism: Shewanella denitrificans OS217
Expression system: Escherichia coli
UniProt:
  • Canonical: Q12ML0 (Residues: 1-137; Coverage: 100%)
Gene name: Sden_2034
Sequence domains: Protein of unknown function (DUF3224)
Structure domains: SO1590-like

Ligands and Environments

1 bound ligand:
Ligand GOL 2 x GOL
1 modified residue:
Ligand MSE 8 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: P41212
Unit cell:
a: 145.83Å b: 145.83Å c: 45.47Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.168 0.167 0.183
Expression system: Escherichia coli

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