2q3u

X-ray diffraction
1.53Å resolution

Ensemble refinement of the protein crystal structure of gene product from Arabidopsis thaliana At5g08170, agmatine iminohydrolase

Released:

Function and Biology Details

Reaction catalysed:
Agmatine + H(2)O = N-carbamoylputrescine + NH(3)
Biochemical function:
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-184586 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Agmatine deiminase Chains: A, B
Molecule details ›
Chains: A, B
Length: 383 amino acids
Theoretical weight: 43.52 KDa
Source organism: Arabidopsis thaliana
Expression system: Escherichia coli
UniProt:
  • Canonical: Q8GWW7 (Residues: 1-383; Coverage: 100%)
Gene names: AIH, At5g08170, EMB1873, T22D6.110
Sequence domains: Porphyromonas-type peptidyl-arginine deiminase
Structure domains: L-arginine/glycine Amidinotransferase; Chain A

Ligands and Environments

3 bound ligands:
1 modified residue:

Experiments and Validation Details

Entry percentile scores
Spacegroup: P21
Unit cell:
a: 58.02Å b: 115.813Å c: 66.634Å
α: 90° β: 97.1° γ: 90°
R-values:
R R work R free
0.135 0.135 0.171
Expression system: Escherichia coli