› 2r8d

X-ray diffraction
2Å resolution

The structure of transporter associated domain CorC_HlyC from a Xylella fastidiosa Temecula1 hemolysin in complex with Mg++ and Mn++

Released:
DOI: 10.2210/pdb2r8d/pdb
PDB entry 2r8d coloured by chain, front view.
PDB entry 2r8d coloured by chain, side view.
PDB entry 2r8d coloured by chain, top view.
Source organism: Xylella fastidiosa Temecula1
Entry authors: Cuff ME, Volkart L, Joachimiak A, Midwest Center for Structural Genomics (MCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-183303 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Hemolysin Chain: A
Molecule details ›
Chain: A
Length: 94 amino acids
Theoretical weight: 10.75 KDa
Source organism: Xylella fastidiosa Temecula1
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q87DZ3 (Residues: 349-439; Coverage: 20%)
Gene names: PD_0536, tlyC
Sequence domains: Transporter associated domain
Structure domains: Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3

Ligands and Environments

2 bound ligands:
Ligand MN 1 x MN
Ligand MG 1 x MG
2 modified residues:
Ligand MSE 2 x MSE
Ligand MLY 1 x MLY

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: I23
Unit cell:
a: 88.061Å b: 88.061Å c: 88.061Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.173 0.171 0.22
Expression system: Escherichia coli BL21(DE3)

Quick links