› 2rcd

X-ray diffraction
2.32Å resolution

CRYSTAL STRUCTURE OF A PROTEIN WITH UNKNOWN FUNCTION FROM DUF3225 FAMILY (ECA3500) FROM PECTOBACTERIUM ATROSEPTICUM SCRI1043 AT 2.32 A RESOLUTION

Released:
DOI: 10.2210/pdb2rcd/pdb
PDB entry 2rcd coloured by chain, front view.
PDB entry 2rcd coloured by chain, side view.
PDB entry 2rcd coloured by chain, top view.
Source organism: Pectobacterium atrosepticum SCRI1043
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-179481 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Oxalurate catabolism protein HpxZ Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 129 amino acids
Theoretical weight: 14.68 KDa
Source organism: Pectobacterium atrosepticum SCRI1043
Expression system: Escherichia coli
UniProt:
  • Canonical: Q6D1E8 (Residues: 1-128; Coverage: 100%)
Gene name: ECA3500
Sequence domains: AtzH-like
Structure domains: Nuclear Transport Factor 2; Chain: A,

Ligands and Environments

1 bound ligand:
Ligand CL 4 x CL
1 modified residue:
Ligand MSE 20 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: C2
Unit cell:
a: 93.375Å b: 93.524Å c: 72.919Å
α: 90° β: 105.32° γ: 90°
R-values:
R R work R free
0.19 0.187 0.242
Expression system: Escherichia coli

Quick links