› 2rdx

X-ray diffraction
2Å resolution

Crystal structure of mandelate racemase/muconate lactonizing enzyme from Roseovarius nubinhibens ISM

Released:
DOI: 10.2210/pdb2rdx/pdb
PDB entry 2rdx coloured by chain, front view.
PDB entry 2rdx coloured by chain, side view.
PDB entry 2rdx coloured by chain, top view.
Source organism: Roseovarius nubinhibens ISM
Entry authors: Patskovsky Y, Bonanno J, Sauder JM, Ozyurt S, Gilmore M, Lau C, Maletic M, Gheyi T, Wasserman SR, Koss J, Gerlt JA, Burley SK, Almo SC, New York SGX Research Center for Structural Genomics (NYSGXRC)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo octamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-107234 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Mandelate racemase/muconate lactonizing enzyme C-terminal domain-containing protein Chains: A, B, C, D, E, F, G, H
Molecule details ›
Chains: A, B, C, D, E, F, G, H
Length: 379 amino acids
Theoretical weight: 41.66 KDa
Source organism: Roseovarius nubinhibens ISM
Expression system: Escherichia coli
UniProt:
  • Canonical: A3SNF8 (Residues: 2-369; Coverage: 100%)
Gene name: ISM_14070
Sequence domains:
Structure domains:

Ligands and Environments

2 bound ligands:
Ligand MG 8 x MG
Ligand GOL 7 x GOL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 31-ID
Spacegroup: I222
Unit cell:
a: 169.415Å b: 169.219Å c: 223.476Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.196 0.194 0.256
Expression system: Escherichia coli

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