› 2rk0

X-ray diffraction
2.04Å resolution

Crystal structure of glyoxylase/bleomycin resistance protein/dioxygenase domain from Frankia sp. EAN1pec

Released:
DOI: 10.2210/pdb2rk0/pdb
PDB entry 2rk0 coloured by chain, front view.
PDB entry 2rk0 coloured by chain, side view.
PDB entry 2rk0 coloured by chain, top view.
Source organism: Frankia sp. EAN1pec
Entry authors: Sugadev R, Burley SK, Swaminathan S, New York SGX Research Center for Structural Genomics (NYSGXRC)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assemblies composition:
homo dimer (preferred)
homo tetramer
Assembly name:
PDBe Complex ID:
PDB-CPX-108732 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
VOC domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 136 amino acids
Theoretical weight: 15.23 KDa
Source organism: Frankia sp. EAN1pec
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A8LBF3 (Residues: 4-128; Coverage: 98%)
Gene name: Franean1_1561
Sequence domains: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
Structure domains: 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 6 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X29A
Spacegroup: P6122
Unit cell:
a: 69.445Å b: 69.445Å c: 213.958Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.234 0.215 0.256
Expression system: Escherichia coli BL21(DE3)

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