› 2rld

X-ray diffraction
1.7Å resolution

CRYSTAL STRUCTURE OF A PROTEIN WITH UNKNOWN FUNCTION FROM S23 RIBOSOMAL PROTEIN FAMILY (BT_0352) FROM BACTEROIDES THETAIOTAOMICRON VPI-5482 AT 1.70 A RESOLUTION

Released:
DOI: 10.2210/pdb2rld/pdb
PDB entry 2rld coloured by chain, front view.
PDB entry 2rld coloured by chain, side view.
PDB entry 2rld coloured by chain, top view.
Source organism: Bacteroides thetaiotaomicron VPI-5482
Entry author: Joint Center for Structural Genomics (JCSG)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo pentamer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-183798 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Four helix bundle protein Chains: A, B, C, D, E
Molecule details ›
Chains: A, B, C, D, E
Length: 121 amino acids
Theoretical weight: 14.28 KDa
Source organism: Bacteroides thetaiotaomicron VPI-5482
Expression system: Escherichia coli
UniProt:
  • Canonical: Q8AAW0 (Residues: 1-120; Coverage: 100%)
Gene name: BT_0352
Sequence domains: 23S rRNA-intervening sequence protein
Structure domains: 23S rRNA-intervening sequence

Ligands and Environments

3 bound ligands:
Ligand CA 3 x CA
Ligand CL 2 x CL
Ligand EDO 16 x EDO
1 modified residue:
Ligand MSE 15 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 8.2.2
Spacegroup: P21
Unit cell:
a: 57.238Å b: 83.823Å c: 63.923Å
α: 90° β: 97.42° γ: 90°
R-values:
R R work R free
0.165 0.163 0.201
Expression system: Escherichia coli

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