› 2rpz

Solution NMR

Solution structure of the monomeric form of mouse APOBEC2

Released:
DOI: 10.2210/pdb2rpz/pdb
PDB entry 2rpz coloured by chain, ensemble of 20 models, front view.
PDB entry 2rpz coloured by chain, ensemble of 20 models, side view.
PDB entry 2rpz coloured by chain, ensemble of 20 models, top view.
Source organism: Mus musculus
Entry authors: Hayashi F, Nagata T, Nagashima T, Muto Y, Inoue M, Kigawa T, Yokoyama S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Function and Biology Details

Reaction catalysed: 
Cytosine(6666) in apolipoprotein B mRNA + H(2)O = uracil(6666) in apolipoprotein B mRNA + NH(3)
Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-194395 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
C->U-editing enzyme APOBEC-2 Chain: A
Molecule details ›
Chain: A
Length: 192 amino acids
Theoretical weight: 21.86 KDa
Source organism: Mus musculus
Expression system: Cell free Synthesis
UniProt:
  • Canonical: Q9WV35 (Residues: 46-224; Coverage: 80%)
Gene name: Apobec2
Sequence domains: APOBEC2
Structure domains: Cytidine Deaminase, domain 2

Ligands and Environments

1 bound ligand:
Ligand ZN 1 x ZN
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: torsion angle dynamics
Expression system: Cell free Synthesis

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