› 2rvo

Solution NMR

Solution structure of a reverse transcriptase recognition site of a LINE RNA from zebrafish

Released:
DOI: 10.2210/pdb2rvo/pdb
PDB entry 2rvo coloured by chain, ensemble of 11 models, front view.
PDB entry 2rvo coloured by chain, ensemble of 11 models, side view.
PDB entry 2rvo coloured by chain, ensemble of 11 models, top view.
Source organism: Danio rerio
Primary publication:
Solution structure of a reverse transcriptase recognition site of a LINE RNA from zebrafish.
Otsu M, Kajikawa M, Okada N, Kawai G
J Biochem 162 279-285 (2017)
PMID: 28431120

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-196590 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
RNA (34-MER) Chain: A
Molecule details ›
Chain: A
Length: 34 nucleotides
Theoretical weight: 10.86 KDa
Source organism: Danio rerio
Expression system: cell-free synthesis

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Chemical shift assignment: 19%
Refinement method: simulated annealing
Expression system: cell-free synthesis

Quick links

Citations

3 citation in other articles

Influence of the 5'-terminal sequences on the 5'-UTR structure of HIV-1 genomic RNA.
Obayashi et al. (2021)
2 more