› 2tmv

Fiber diffraction
2.9Å resolution

VISUALIZATION OF PROTEIN-NUCLEIC ACID INTERACTIONS IN A VIRUS. REFINED STRUCTURE OF INTACT TOBACCO MOSAIC VIRUS AT 2.9 ANGSTROMS RESOLUTION BY X-RAY FIBER DIFFRACTION

Released:
DOI: 10.2210/pdb2tmv/pdb
PDB entry 2tmv coloured by chain, front view.
PDB entry 2tmv coloured by chain, side view.
PDB entry 2tmv coloured by chain, top view.
Source organism: Tobacco mosaic virus (vulgare)
Primary publication:
Visualization of protein-nucleic acid interactions in a virus. Refined structure of intact tobacco mosaic virus at 2.9 A resolution by X-ray fiber diffraction.
Namba K, Pattanayek R, Stubbs G
J Mol Biol 208 307-25 (1989)
PMID: 2769760

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
hetero 98-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-159631 (preferred)
Entry contents:
1 distinct polypeptide molecule
1 distinct RNA molecule
Macromolecules (2 distinct):
Capsid protein Chain: P
Molecule details ›
Chain: P
Length: 158 amino acids
Theoretical weight: 17.51 KDa
Source organism: Tobacco mosaic virus (vulgare)
Expression system: Not provided
UniProt:
  • Canonical: P69687 (Residues: 2-159; Coverage: 99%)
Gene name: CP
Sequence domains: Virus coat protein (TMV like)
Structure domains: Tobacco mosaic virus-like, coat protein
RNA (5'-R(P*GP*AP*A)-3') Chain: R
Molecule details ›
Chain: R
Length: 3 nucleotides
Theoretical weight: 959 Da
Source organism: Tobacco mosaic virus (vulgare)
Expression system: Not provided

Ligands and Environments

1 bound ligand:
Ligand CA 1 x CA
No modified residues

Experiments and Validation Details

Entry percentile scores
R-values:
R R work R free
0.096 not available not available
Expression system: Not provided

Quick links

Citations

39 review citations

Mechanisms of cooperativity and allosteric regulation in proteins.
Perutz MF. (1989)
38 more

23 mentions without citation

Viral nanoparticles for drug delivery, imaging, immunotherapy, and theranostic applications.
Chung et al. (2020)
22 more