2vbc

X-ray diffraction
3.15Å resolution

Crystal structure of the NS3 protease-helicase from Dengue virus

Released:
Source organism: dengue virus type 4

Function and Biology Details

Reactions catalysed:
Selective hydrolysis of -Xaa-Xaa-|-Yaa- bonds in which each of the Xaa can be either Arg or Lys and Yaa can be either Ser or Ala.
NTP + H(2)O = NDP + phosphate
ATP + H(2)O = ADP + phosphate
Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-174050 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
DENGUE 4 NS3 FULL-LENGTH PROTEIN Chain: A
Molecule details ›
Chain: A
Length: 618 amino acids
Theoretical weight: 69.52 KDa
Source organism: dengue virus type 4
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: Q2TN89 (Residues: 1475-2092; Coverage: 18%)
Sequence domains:
Structure domains:
Flavivirus NS2B domain-containing protein Chain: B
Molecule details ›
Chain: B
Length: 31 amino acids
Theoretical weight: 2.9 KDa
Source organism: dengue virus type 4
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: Q91EQ2 (Residues: 101-123; Coverage: 17%)

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID23-1
Spacegroup: P21
Unit cell:
a: 52.866Å b: 88.242Å c: 76.676Å
α: 90° β: 94.21° γ: 90°
R-values:
R R work R free
0.206 0.202 0.277
Expression system: Escherichia coli BL21