2wv4

X-ray diffraction
2.5Å resolution

Crystal structure of foot-and-mouth disease virus 3C protease in complex with a decameric peptide corresponding to the VP1-2A cleavage junction

Released:

Function and Biology Details

Reactions catalysed:
Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1)
Selective cleavage of Gln-|-Gly bond in the poliovirus polyprotein. In other picornavirus reactions Glu may be substituted for Gln, and Ser or Thr for Gly.
Autocatalytically cleaves itself from the polyprotein of the foot-and-mouth disease virus by hydrolysis of a Lys-|-Gly bond, but then cleaves host cell initiation factor eIF-4G at bonds -Gly-|-Arg- and -Lys-|-Arg-.
NTP + H(2)O = NDP + phosphate
Biological process:
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-136756 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Protease 3C Chains: A, B
Molecule details ›
Chains: A, B
Length: 214 amino acids
Theoretical weight: 23.05 KDa
Source organism: Foot-and-mouth disease virus (strain A10-61)
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P03306 (Residues: 1650-1862; Coverage: 9%)
Sequence domains: 3C cysteine protease (picornain 3C)
Structure domains: Trypsin-like serine proteases
Protein 2A Chains: C, D
Molecule details ›
Chains: C, D
Length: 11 amino acids
Theoretical weight: 1.14 KDa
Source organism: Foot-and-mouth disease virus (strain A10-61)
Expression system: Not provided
UniProt:
  • Canonical: P03306 (Residues: 931-940; Coverage: 0%)

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID23-2
Spacegroup: P212121
Unit cell:
a: 64.76Å b: 75.25Å c: 85.97Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.212 0.212 0.266
Expression systems:
  • Escherichia coli BL21(DE3)
  • Not provided